BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F03SP1|AL430082
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig191 997 0.0
3x_Contig548 285 8e-77
>3x_Contig191
Length = 1343
Score = 997 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus
Query: 1 gatcgtgaacttggtgctaataacatcggtatggttgcattcaaggttactgcaaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gatcgtgaacttggtgctaataacatcggtatggttgcattcaaggttactgcaaaaact 900
Query: 61 ccagaatactctcatggccgtcaatttgtcatagtcgccaatgatatcactttcaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccagaatactctcatggccgtcaatttgtcatagtcgccaatgatatcactttcaaaatt 960
Query: 121 ggttcgttcggtccacaggaagatgccttcttcaacaaggttactgaatatgcaagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggttcgttcggtccacaggaagatgccttcttcaacaaggttactgaatatgcaagaaag 1020
Query: 181 cgtggtatcccaagaatatacttatctgccaattcaggtgcaagaattggtattgccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgtggtatcccaagaatatacttatctgccaattcaggtgcaagaattggtattgccgaa 1080
Query: 241 gagcttgttccattgttccagattgcttggaatgatgaaaaagatccagcaaagggtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gagcttgttccattgttccagattgcttggaatgatgaaaaagatccagcaaagggtttc 1140
Query: 301 caatacttatggttgtcagatgagtctcttgaagaactcaaatctaagggtaaagacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 caatacttatggttgtcagatgagtctcttgaagaactcaaatctaagggtaaagacaat 1200
Query: 361 gctgttgttaccgaatgtgttgttgaagaaggtaaggtcagaaacgtcattactgctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gctgttgttaccgaatgtgttgttgaagaaggtaaggtcagaaacgtcattactgctatt 1260
Query: 421 atcggttcggaagatggtcttggtgttgagtgtttgaagggatccggtttaattgcaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atcggttcggaagatggtcttggtgttgagtgtttgaagggatccggtttaattgcaggt 1320
Query: 481 gccacttcaagagcgtacaagga 503
|||||||||||||||||||||||
Sbjct: 1321 gccacttcaagagcgtacaagga 1343
>3x_Contig548
Length = 2225
Score = 285 bits (144), Expect = 8e-77
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 778 aaacgtgatctaccggttcctattttggaatctgaagataaatgggacagaaaaattgac 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaacgtgatctaccggttcctattttggaatctgaagataaatgggacagaaaaattgac 445
Query: 838 tatgctccatctttaaacgaacagtacgatgttaggtggatgattgcaggtcgtgaatct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatgctccatctttaaacgaacagtacgatgttaggtggatgattgcaggtcgtgaatct 505
Query: 898 gccgatggtttcgaatatggtctt 921
||||||||||||||||||||||||
Sbjct: 506 gccgatggtttcgaatatggtctt 529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6664
Number of Sequences: 1807
Number of extensions: 6664
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 2
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)